WSJT-X/boost/libs/numeric/ublas/doc/operations_overview.html

262 lines
11 KiB
HTML
Raw Normal View History

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta name="generator" content=
"HTML Tidy for Linux/x86 (vers 1st March 2004), see www.w3.org" />
<meta name="GENERATOR" content="Quanta Plus" />
<meta http-equiv="Content-Type" content=
"text/html; charset=us-ascii" />
<link rel="stylesheet" href="../../../../boost.css" type="text/css"/>
<link rel="stylesheet" href="ublas.css" type="text/css" />
<script type="text/javascript" src="js/jquery-1.3.2.min.js" async="async" ></script>
<script type="text/javascript" src="js/jquery.toc-gw.js" async="async" ></script>
<title>uBLAS operations overview</title>
</head>
<body>
<h1><img src="../../../../boost.png" align="middle" />Overview of Matrix and Vector Operations</h1>
<div class="toc" id="toc"></div>
<dl>
<dt>Contents:</dt>
<dd><a href="#blas">Basic Linear Algebra</a></dd>
<dd><a href="#advanced">Advanced Functions</a></dd>
<dd><a href="#sub">Submatrices, Subvectors</a></dd>
<dd><a href="#speed">Speed Improvements</a></dd>
</dl>
<h2>Definitions</h2>
<table style="" summary="notation">
<tr><td><code>A, B, C</code></td>
<td> are matrices</td></tr>
<tr><td><code>u, v, w</code></td>
<td>are vectors</td></tr>
<tr><td><code>i, j, k</code></td>
<td>are integer values</td></tr>
<tr><td><code>t, t1, t2</code></td>
<td>are scalar values</td></tr>
<tr><td><code>r, r1, r2</code></td>
<td>are <a href="range.html">ranges</a>, e.g. <code>range(0, 3)</code></td></tr>
<tr><td><code>s, s1, s2</code></td>
<td>are <a href="range.html#slice">slices</a>, e.g. <code>slice(0, 1, 3)</code></td></tr>
</table>
<h2><a name="blas">Basic Linear Algebra</a></h2>
<h3>standard operations: addition, subtraction, multiplication by a
scalar</h3>
<pre><code>
C = A + B; C = A - B; C = -A;
w = u + v; w = u - v; w = -u;
C = t * A; C = A * t; C = A / t;
w = t * u; w = u * t; w = u / t;
</code></pre>
<h3>computed assignments</h3>
<pre><code>
C += A; C -= A;
w += u; w -= u;
C *= t; C /= t;
w *= t; w /= t;
</code></pre>
<h3>inner, outer and other products</h3>
<pre><code>
t = inner_prod(u, v);
C = outer_prod(u, v);
w = prod(A, u); w = prod(u, A); w = prec_prod(A, u); w = prec_prod(u, A);
C = prod(A, B); C = prec_prod(A, B);
w = element_prod(u, v); w = element_div(u, v);
C = element_prod(A, B); C = element_div(A, B);
</code></pre>
<h3>transformations</h3>
<pre><code>
w = conj(u); w = real(u); w = imag(u);
C = trans(A); C = conj(A); C = herm(A); C = real(A); C = imag(A);
</code></pre>
<h2><a name="advanced">Advanced functions</a></h2>
<h3>norms</h3>
<pre><code>
t = norm_inf(v); i = index_norm_inf(v);
t = norm_1(v); t = norm_2(v);
t = norm_inf(A); i = index_norm_inf(A);
t = norm_1(A); t = norm_frobenius(A);
</code></pre>
<h3>products</h3>
<pre><code>
axpy_prod(A, u, w, true); // w = A * u
axpy_prod(A, u, w, false); // w += A * u
axpy_prod(u, A, w, true); // w = trans(A) * u
axpy_prod(u, A, w, false); // w += trans(A) * u
axpy_prod(A, B, C, true); // C = A * B
axpy_prod(A, B, C, false); // C += A * B
</code></pre>
<p><em>Note:</em> The last argument (<code>bool init</code>) of
<code>axpy_prod</code> is optional. Currently it defaults to
<code>true</code>, but this may change in the future. Setting the
<code>init</code> to <code>true</code> is equivalent to calling
<code>w.clear()</code> before <code>axpy_prod</code>.
There are some specialisation for products of compressed matrices that give a
large speed up compared to <code>prod</code>.</p>
<pre><code>
w = block_prod&lt;matrix_type, 64&gt; (A, u); // w = A * u
w = block_prod&lt;matrix_type, 64&gt; (u, A); // w = trans(A) * u
C = block_prod&lt;matrix_type, 64&gt; (A, B); // C = A * B
</code></pre>
<p><em>Note:</em> The blocksize can be any integer. However, the
actual speed depends very significantly on the combination of blocksize,
CPU and compiler. The function <code>block_prod</code> is designed
for large dense matrices.</p>
<h3>rank-k updates</h3>
<pre><code>
opb_prod(A, B, C, true); // C = A * B
opb_prod(A, B, C, false); // C += A * B
</code></pre>
<p><em>Note:</em> The last argument (<code>bool init</code>) of
<code>opb_prod</code> is optional. Currently it defaults to
<code>true</code>, but this may change in the future. This function
may give a speedup if <code>A</code> has less columns than rows,
because the product is computed as a sum of outer products.</p>
<h2><a name="sub">Submatrices, Subvectors</a></h2>
<p>Accessing submatrices and subvectors via <b>proxies</b> using <code>project</code> functions:</p>
<pre><code>
w = project(u, r); // the subvector of u specifed by the index range r
w = project(u, s); // the subvector of u specifed by the index slice s
C = project(A, r1, r2); // the submatrix of A specified by the two index ranges r1 and r2
C = project(A, s1, s2); // the submatrix of A specified by the two index slices s1 and s2
w = row(A, i); w = column(A, j); // a row or column of matrix as a vector
</code></pre>
<p>Assigning to submatrices and subvectors via <b>proxies</b> using <code>project</code> functions:</p>
<pre><code>
project(u, r) = w; // assign the subvector of u specifed by the index range r
project(u, s) = w; // assign the subvector of u specifed by the index slice s
project(A, r1, r2) = C; // assign the submatrix of A specified by the two index ranges r1 and r2
project(A, s1, s2) = C; // assign the submatrix of A specified by the two index slices s1 and s2
row(A, i) = w; column(A, j) = w; // a row or column of matrix as a vector
</code></pre>
<p><em>Note:</em> A range <code>r = range(start, stop)</code>
contains all indices <code>i</code> with <code>start &lt;= i &lt;
stop</code>. A slice is something more general. The slice
<code>s = slice(start, stride, size)</code> contains the indices
<code>start, start+stride, ..., start+(size-1)*stride</code>. The
stride can be 0 or negative! If <code>start >= stop</code> for a range
or <code>size == 0</code> for a slice then it contains no elements.</p>
<p>Sub-ranges and sub-slices of vectors and matrices can be created directly with the <code>subrange</code> and <code>sublice</code> functions:</p>
<pre><code>
w = subrange(u, 0, 2); // the 2 element subvector of u
w = subslice(u, 0, 1, 2); // the 2 element subvector of u
C = subrange(A, 0,2, 0,3); // the 2x3 element submatrix of A
C = subslice(A, 0,1,2, 0,1,3); // the 2x3 element submatrix of A
subrange(u, 0, 2) = w; // assign the 2 element subvector of u
subslice(u, 0, 1, 2) = w; // assign the 2 element subvector of u
subrange(A, 0,2, 0,3) = C; // assign the 2x3 element submatrix of A
subrange(A, 0,1,2, 0,1,3) = C; // assigne the 2x3 element submatrix of A
</code></pre>
<p>There are to more ways to access some matrix elements as a
vector:</p>
<pre><code>matrix_vector_range&lt;matrix_type&gt; (A, r1, r2);
matrix_vector_slice&lt;matrix_type&gt; (A, s1, s2);
</code></pre>
<p><em>Note:</em> These matrix proxies take a sequence of elements
of a matrix and allow you to access these as a vector. In
particular <code>matrix_vector_slice</code> can do this in a very
general way. <code>matrix_vector_range</code> is less useful as the
elements must lie along a diagonal.</p>
<p><em>Example:</em> To access the first two elements of a sub
column of a matrix we access the row with a slice with stride 1 and
the column with a slice with stride 0 thus:<br />
<code>matrix_vector_slice&lt;matrix_type&gt; (A, slice(0,1,2),
slice(0,0,2));
</code></p>
<h2><a name="speed">Speed improvements</a></h2>
<h3><a name='noalias'>Matrix / Vector assignment</a></h3>
<p>If you know for sure that the left hand expression and the right
hand expression have no common storage, then assignment has
no <em>aliasing</em>. A more efficient assignment can be specified
in this case:</p>
<pre><code>noalias(C) = prod(A, B);
</code></pre>
<p>This avoids the creation of a temporary matrix that is required in a normal assignment.
'noalias' assignment requires that the left and right hand side be size conformant.</p>
<h3>Sparse element access</h3>
<p>The matrix element access function <code>A(i1,i2)</code> or the equivalent vector
element access functions (<code>v(i) or v[i]</code>) usually create 'sparse element proxies'
when applied to a sparse matrix or vector. These <em>proxies</em> allow access to elements
without having to worry about nasty C++ issues where references are invalidated.</p>
<p>These 'sparse element proxies' can be implemented more efficiently when applied to <code>const</code>
objects.
Sadly in C++ there is no way to distinguish between an element access on the left and right hand side of
an assignment. Most often elements on the right hand side will not be changed and therefore it would
be better to use the <code>const</code> proxies. We can do this by making the matrix or vector
<code>const</code> before accessing it's elements. For example:</p>
<pre><code>value = const_cast&lt;const VEC&gt;(v)[i]; // VEC is the type of V
</code></pre>
<p>If more then one element needs to be accessed <code>const_iterator</code>'s should be used
in preference to <code>iterator</code>'s for the same reason. For the more daring 'sparse element proxies'
can be completely turned off in uBLAS by defining the configuration macro <code>BOOST_UBLAS_NO_ELEMENT_PROXIES</code>.
</p>
<h3>Controlling the complexity of nested products</h3>
<p>What is the complexity (the number of add and multiply operations) required to compute the following?
</p>
<pre>
R = prod(A, prod(B,C));
</pre>
<p>Firstly the complexity depends on matrix size. Also since prod is transitive (not commutative)
the bracket order affects the complexity.
</p>
<p>uBLAS evaluates expressions without matrix or vector temporaries and honours
the bracketing structure. However avoiding temporaries for nested product unnecessarly increases the complexity.
Conversly by explictly using temporary matrices the complexity of a nested product can be reduced.
</p>
<p>uBLAS provides 3 alternative syntaxes for this purpose:
</p>
<pre>
temp_type T = prod(B,C); R = prod(A,T); // Preferable if T is preallocated
</pre>
<pre>
prod(A, temp_type(prod(B,C));
</pre>
<pre>
prod(A, prod&lt;temp_type&gt;(B,C));
</pre>
<p>The 'temp_type' is important. Given A,B,C are all of the same type. Say
matrix&lt;float&gt;, the choice is easy. However if the value_type is mixed (int with float or double)
or the matrix type is mixed (sparse with symmetric) the best solution is not so obvious. It is up to you! It
depends on numerical properties of A and the result of the prod(B,C).
</p>
<hr />
<p>Copyright (&copy;) 2000-2007 Joerg Walter, Mathias Koch, Gunter
Winkler, Michael Stevens<br />
Use, modification and distribution are subject to the
Boost Software License, Version 1.0.
(See accompanying file LICENSE_1_0.txt
or copy at <a href="http://www.boost.org/LICENSE_1_0.txt">
http://www.boost.org/LICENSE_1_0.txt
</a>).
</p>
<script type="text/javascript">
(function($) {
$('#toc').toc();
})(jQuery);
</script>
</body>
</html>